Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882754.1_cds_XP_016438272.1_33952
CDS Infomation

[gene=LOC107764231] [db_xref=GeneID:107764231] [protein=origin of replication complex subunit 1-like] [protein_id=XP_016438272.1] [location=join(44243..45015,45127..45262,45683..45835,45932..46072,46159..46310,46391..46490,46667..46789,46867..47028,47113..47170,47259..47437,47586..47700,48453..48574)] [gbkey=CDS]
Sequence

ATGGCAGAAACCCCAAAGAAGAAAGCCAAACAATCCCTTAACACAACCCCCATTAAGCAA
CACAAGCAACTGCCTGTTTCTAATTTATCTCCTTTAAACCCTATTATCCCTCCAACCCCA
CAAACCCTAGACCCCACCCCTCGCCGCCGCTCCCTCCGTCTTACCTCCACCCCTCAAACC
CCACCACCACTACTTCCTTCGCCTCCATCTTCTGCCCGCTTCCGTAAATCTCTCAAATTC
ACTCCCAAAAGTGCCACAAATTCAGCAAGAAGAAAATCAAAGCTCACTGTTTCTACCCCC
ATTTCGACACCGGGACCCACTGAATCGAAGAGGAAAAGGAAGTCTTCAGAGAACAAGAAT
GTGGCTGTTGAAAAAAGAAGCAGTTTAAGGGGTTGTAAGAAGAAGGTGTATTATAAAAAG
GTGGTTTATGATGGGGGAGAGTTTGCTGTGGGGGATGATGTGTATGTGAAGAGAAGTGAA
GATGCGAGTTCGGATAATGAGGATCCCGAAGTGGAGGAATGTAGGATTTGTTATAGGCCA
GCAGGGAGGGTGATTATGGTTGAATGTGATGAATGCTTAGGAGGGTTTCATTTGAAGTGT
TTGAAGCCACCACTGAAAAAGGTTCCTGAAGGGGATTGGATTTGTGTGTACTGTGAGGCG
AAAAAATTAGGGAAAATGGTGGAAATGCCCGCACCACCCAAGGGAAAGAAACGGGTAAGG
ACTGCCAAGGAGAAGTTACTTGACAGTGATCTATGGGCGGCTCGTATTGACAGTGTATGG
AAAGAAGTGGATGGTACCTACTGGTTTCGGGCACATTGGTATATTATTCCTGAGGAAACG
GCTGCAGGAAGACAGCCACATAACTTAAGGAGAGAACTCTATCGGACTAATGATTTTGCT
GATGTTGAGATGGAATCTGTCATCAGGCATTGCTATGTTAAGAATCCAAAAGAATTTGAG
AAGGCGAGAAATGATGGAGATGATGTTTTCCTCTGTGAATATGAGTATGACATTCACTGG
CATAGTTTCAAGCGCATTGCTGAGATTGAAGATAATGATGTGGACGAGGAAGAAGCTGAG
AACGACGAGGACTGGAACTCTTGCGAAGATCCAGATTCTGACGTGGATGATGAAATAGAG
TATGAAGAGGAAAACCAAACTAATCCATTAAGCAGACCATCTCCAGCTCATCCGTTGGCT
GCGAATTCAAGAAAGGGACGCTTTTTTGGACTACAAAAGATAGGTGCAAAGAAGATACCA
GAACATGTGAGATCTCACAAGCTTACTGAACTTGAGAAAGCAAAAGGAACCCTTTTACTG
GCAACTTTGCCCAAGTCTCTACCTTGTAGGACTAAAGAAATGGAAGAGATAACTACTTTC
ATAAGAGGTGCAATATGTGAGGATCAATGCCTGGGCAGATGCCTTTACATACATGGTGTT
CCTGGGACAGGAAAGACAATGAGTGTACTAGCAGTAATGAGGAATTTAAGATGTGAAGTT
GATGCAGGGAGCATTAAACCTTATTGTTTTGTGGAGATTAATGGCCTAAAATTGGCTTCA
CCTGAGAATATTTACAGTGTTATTTATGAAGCACTTAGTGGACATAGGGTCGGTTGGAAA
AAGGCTCTTCACTTCTTGAATGAGCGGTTTTCAGATGTGACTGAATGTAGCAAAGAGGAC
AACCGCCCATGTATTCTACTTATAGATGAACTTGATCTCCTGGTTACCAGAAATCAAGCG
GTTTTATATAACATTCTCGATTGGCCTACAAAGCCAAATTCCAAACTGATTGTTATAGGT
ATTGCAAATACTATGGATCTTCCGGAGAAGTTGCTTCCGCGGATTTCAAGTCGTATGGGC
ATACAAAGACTTTGCTTTGGTCCATATAACTATCAGCAGCTTCAAGAAATTATTGTAACT
CGCCTCAATGGAATTGATGCCTTTGAAAAACCGGCAATTGAATTTGCTTCAAGGAAGGTG
GCAGCCGTTTCAGGCGATGCACGCCGTGCACTAGAAATATGTAGGCGAGCTGCGGAACTT
GCAGACTATCATGCTAAGAAATTGCTATCAATTCCCAATTCTGCTGCAGCAGGTAAAATG
CTTGTCAGAATGGCAGATGTTGAAGCAGCCATTCAGGAAATGTTCCAGGCTCCTCATATC
CAAGTGAGTCCAAAAGGAACACACTGGTGTAATCTCAATATTCATTTTAGTTAA

Peptide Sequence

PEP ID

XP_016438272.1
PEP Infomation

PREDICTED: origin of replication complex subunit 1-like [Nicotiana tabacum]
Sequence

MAETPKKKAKQSLNTTPIKQHKQLPVSNLSPLNPIIPPTPQTLDPTPRRRSLRLTSTPQT
PPPLLPSPPSSARFRKSLKFTPKSATNSARRKSKLTVSTPISTPGPTESKRKRKSSENKN
VAVEKRSSLRGCKKKVYYKKVVYDGGEFAVGDDVYVKRSEDASSDNEDPEVEECRICYRP
AGRVIMVECDECLGGFHLKCLKPPLKKVPEGDWICVYCEAKKLGKMVEMPAPPKGKKRVR
TAKEKLLDSDLWAARIDSVWKEVDGTYWFRAHWYIIPEETAAGRQPHNLRRELYRTNDFA
DVEMESVIRHCYVKNPKEFEKARNDGDDVFLCEYEYDIHWHSFKRIAEIEDNDVDEEEAE
NDEDWNSCEDPDSDVDDEIEYEEENQTNPLSRPSPAHPLAANSRKGRFFGLQKIGAKKIP
EHVRSHKLTELEKAKGTLLLATLPKSLPCRTKEMEEITTFIRGAICEDQCLGRCLYIHGV
PGTGKTMSVLAVMRNLRCEVDAGSIKPYCFVEINGLKLASPENIYSVIYEALSGHRVGWK
KALHFLNERFSDVTECSKEDNRPCILLIDELDLLVTRNQAVLYNILDWPTKPNSKLIVIG
IANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIIVTRLNGIDAFEKPAIEFASRKV
AAVSGDARRALEICRRAAELADYHAKKLLSIPNSAAAGKMLVRMADVEAAIQEMFQAPHI
QVSPKGTHWCNLNIHFS

Transcript Sequence

Gene sequence data has not been registered.